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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800784.1_cds_XP_016471820.1_6381
CDS Infomation

[gene=LOC107793887] [db_xref=GeneID:107793887] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like] [protein_id=XP_016471820.1] [location=complement(join(36549..36722,37477..37523,37618..37702,38192..38270,38360..38513,38993..39072,39159..39390,40854..40965))] [gbkey=CDS]
Sequence

ATGTTTAGGTTGATAACAGGTAGACCAGGTCCAAGTGGTTTTGGATCAGCTTCCACTGCT
GAACAAGTTACTGATGGAATTGATGGCTCCAATCTTACAGCCATTGTTACAGGAGGTGCA
AGCGGCATTGGTTTGGAGACAGCAAGAGTTTTAGCAATGAGGAATGCCCATGTCATTATT
GCAGCAAGAAATATGGAGGCTGCAAATGAAGCAAAACAGCGTATACTAAAGGACAATAAA
GCTGCTCGCGTCGATATTGAGAAACTTGACTTGAGCTCAATTAGATCCGTCAAGGCATTT
GCAGATAATTTCATAGCACTTAACCTTCCTCTTAACATCTTAATTAACAATGCAGGTATC
ATGTTCTGTCCATTTCAGCTTTCAGAAGATGGCATTGAGATGCAATTCGCCACAAATCAT
CTAGGTCACTTCTACTTGACTAATCTGCTTATAGACAATATGAAGGAAACAGCAAAAGTT
AGTGGTATTGAGGGTAGGATTGTGAACTTGTCATCAGTAGCTCACCTCTGCCCTTATAAA
AAAGGAATAAAATTTCACAAAATCAATGACAAGAGCAGTTATCAAGACAAACTAGCATAT
GGACAATCCAAATTAGCCAATATTTTACATGCTAATGAGCTTTCTCGCCGCTTGCAGGAA
GAAGGAGCAAATATAACTGTCAACTCAGTGCATCCAGGTTTAATAATGACAAACCTCATG
AGGCATTCTGCTCTATTGATGAGAATCTTAAGGGCTTTCACTTGTTTTCTATGGAAGAAT
GTTCCTCAGGGAGCAGCTACAACATGCTATGTTGCCCTCCATCCAAGACTGAAGGGAGTG
ACTGGAAAGTACTTCCTCGAGTGCAACGAGTACAAGCCAAGCAAGCTAGCACGAGACGAA
GCTTTAGCACGTAACCTTTGGGATTTCAGCAACAATTTGGTTAATGCAAGTCTAAAGACT
TGA

Peptide Sequence

PEP ID

XP_016471820.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Nicotiana tabacum]
Sequence

MFRLITGRPGPSGFGSASTAEQVTDGIDGSNLTAIVTGGASGIGLETARVLAMRNAHVII
AARNMEAANEAKQRILKDNKAARVDIEKLDLSSIRSVKAFADNFIALNLPLNILINNAGI
MFCPFQLSEDGIEMQFATNHLGHFYLTNLLIDNMKETAKVSGIEGRIVNLSSVAHLCPYK
KGIKFHKINDKSSYQDKLAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTNLM
RHSALLMRILRAFTCFLWKNVPQGAATTCYVALHPRLKGVTGKYFLECNEYKPSKLARDE
ALARNLWDFSNNLVNASLKT

Transcript Sequence

Gene sequence data has not been registered.